MotifScope
Download
How it works
Annotate your tandem repeats in 3 simple steps
1
Paste your sequences in the text area (FASTA format), or upload your FASTA file.
2
Change MotifScope parameters or leave them as default
3
Add your email so that we can reach you when your results are ready. Then submit!
Paste your sequences
Or, upload your FASTA file
Example FASTA file:
example.fa
Motifscope Parameters
Cluster sequences:
yes
no
Multiple sequence alignment:
None
On motifs
On nucleotides
Upload TSV file containing sample class information (optional,
example.sample.tsv
):
Minimum length of motif to characterize:
Maximum length of motif to characterize:
Upload file containing tab-separated known motifs (optional,
example.motifs.tsv
):
Convert FASTA input to reverse complement strand:
no
yes
Generate figure:
yes
no
Figure format:
PDF
PNG
Email
Please enter your email address below. The results will be sent to you: